The detailed information of tRNA gene sequence


Sequence ID>ENV08001308
Genome IDABMW01021538
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 121
End posion on genome 45
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
nnnnnntttt
tRNA gene sequence 
GGGGGATTAGCTCATTTGGCTAGAGCGCTACGCTGGCAGCGTAGAGGCGACCGGTTCGAA
TCCGGTATTCTCCACTA
Downstream region at tRNA end position 
aatttacttt
Secondary structure (Cloverleaf model)
>ENV08001308	Ala	GGC
                   t      ACTA aatttacttt
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T A
                    T     T G G C C     A
      T T A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGCG
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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