The detailed information of tRNA gene sequence


Sequence ID>WENV183762030
Genome IDPPYE01270674
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 109
End posion on genome 200
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtgagacat
tRNA gene sequence 
GGAGAGGTGGTCGAGTTGGTTTATGGCACCAGTCTTGAAAATTGGCGTGCGTTTATAGCG
TACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
agtataagag
Secondary structure (Cloverleaf model)
>WENV183762030	Ser	TGA
                   t      GCCA agtataagag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       G T G G G     C
  G         + | + |                 T T
  T         T G G C
    T T A          A     CGTGCGTTTATAGCGTACC
                    C - G
                    C - G
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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