The detailed information of tRNA gene sequence


Sequence ID>ENV08001315
Genome IDABMW01036547
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 26
End posion on genome 101
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cctcaacaat
tRNA gene sequence 
GGTTCTGTAGCTCAGTTGGTAGAGCACGACACTCTTAATGTTGGGGTCGTGGGTTCGAGA
CCCACCGGGACCACAA
Downstream region at tRNA end position 
aaccgggcga
Secondary structure (Cloverleaf model)
>ENV08001315	Lys	CTT
                   t      ACAA aaccgggcga
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     T + G
                     G - C          A G
                    T     C A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G + T
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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