The detailed information of tRNA gene sequence


Sequence ID>WENV183762557
Genome IDPPYE01276829
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 12106
End posion on genome 12196
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcacaacagt
tRNA gene sequence 
GGAGTCATGCCTGAGTGGCCGATAGGGGCACCCTGCTAAGGTGTTAGTCGTGTTTAGCGG
CTCGAGGGTTCGAATCCCTCTGACTCCGCCA
Downstream region at tRNA end position 
tgagggtttt
Secondary structure (Cloverleaf model)
>WENV183762557	Ser	GCT
                   t      GCCA tgagggtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G       + | | |                 T T
    C       T A G G
      C G A        G     TAGTCGTGTTTAGCGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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