The detailed information of tRNA gene sequence


Sequence ID>WENV183762571
Genome IDPPYE01276997
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 5649
End posion on genome 5574
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
AGGGAAGTGGCGCAATTGGTAGCGCAACGGTCTCCAAAACCGTAGGTTGTGGGTTCGAGT
CCCGCCTTCCCTGCCA
Downstream region at tRNA end position 
agttcttaca
Secondary structure (Cloverleaf model)
>WENV183762571	Trp	CCA
                   n      GCCA agttcttaca
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | + | | |     G
    T       C G C G       G T G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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