The detailed information of tRNA gene sequence


Sequence ID>ENV08001318
Genome IDABMW01043798
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 40
End posion on genome 116
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaccactgc
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
aaaannnnnn
Secondary structure (Cloverleaf model)
>ENV08001318	Asp	GTC
                   c      GCCA aaaannnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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