The detailed information of tRNA gene sequence


Sequence ID>WENV183762855
Genome IDPPYE01287228
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 952
End posion on genome 1041
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacccttgcT
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGTAACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGTtt
Downstream region at tRNA end position 
agtcagtatt
Secondary structure (Cloverleaf model)
>WENV183762855	Ser	GCT
                   T      GTtt agtcagtatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGTAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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