The detailed information of tRNA gene sequence


Sequence ID>WENV183762956
Genome IDPPYE01293052
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 77579
End posion on genome 77652
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cgttaaacat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCATTCGTTCGAGT
CGGATCTCCGCAACta
Downstream region at tRNA end position 
aagataagaa
Secondary structure (Cloverleaf model)
>WENV183762956	fMet	CAT
                   t      ACta aagataagaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A G G C     A
      T G A        G      | | + | |     G
    T       C G A G       A T T C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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