The detailed information of tRNA gene sequence


Sequence ID>ENV08001320
Genome IDABMW01045926
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 107
End posion on genome 31
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaattattt
tRNA gene sequence 
CGTGTGGTAGAGCAGTTGGTTAGCTTGCTGGACTCATAATCCAGAGGTCGGAGGTTCGAG
TCCTCCCCACGCAACTA
Downstream region at tRNA end position 
aaataaacca
Secondary structure (Cloverleaf model)
>ENV08001320	Met	CAT
                   t      ACTA aaataaacca
                     C   A
                     G - C
                     T + G
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | +                 T T
    G       G C T T
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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