The detailed information of tRNA gene sequence


Sequence ID>WENV183763030
Genome IDPPYE01293112
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 104538
End posion on genome 104626
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaacatatag
tRNA gene sequence 
GGAGCGGTATCGAAGTGGTCATAACGGGCCTGACTCGAAATCAGGTAGTCCTCACGGGCT
CGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
tcgaaaaatc
Secondary structure (Cloverleaf model)
>WENV183763030	Ser	CGA
                   g      GCCA tcgaaaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | +                 T T
  C         A C G G
    A T A          G     TAGTCCTCACGGGCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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