The detailed information of tRNA gene sequence


Sequence ID>WENV183763139
Genome IDPPYE01293336
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 47423
End posion on genome 47512
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaggcattT
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGTAACCGG
CGCGAGGGTTCAAATCCCTCCTTCTCCGTtt
Downstream region at tRNA end position 
aaaagccaaa
Secondary structure (Cloverleaf model)
>WENV183763139	Ser	GCT
                   T      GTtt aaaagccaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGTAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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