The detailed information of tRNA gene sequence


Sequence ID>WENV183763288
Genome IDPPYE01293807
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 15795
End posion on genome 15721
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnntat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGAAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCAACtt
Downstream region at tRNA end position 
acattggcaa
Secondary structure (Cloverleaf model)
>WENV183763288	fMet	CAT
                   t      ACtt acattggcaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G A A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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