The detailed information of tRNA gene sequence


Sequence ID>ENV08001325
Genome IDABMW01057314
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ngatgataaa
tRNA gene sequence 
GGGACGGTAGCTCAACTCGGAAGAGCACCCGGCTTAAGTCGGGAAGGTTCCGGGTTCGAA
TCCCGGCCGTCCTGCCG
Downstream region at tRNA end position 
gcagtgttgg
Secondary structure (Cloverleaf model)
>ENV08001325	Leu	TAA
                   a      GCCG gcagtgttgg
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C A A        A      | | | | |     G
    T       C T C G       C C G G G     C
    C       | | | |                 T T
    G       G A G C
      G A A        A     AGGTT
                    C   A
                    C - G
                    C - G
                    G   G
                    G - C
                  C       T
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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