The detailed information of tRNA gene sequence


Sequence ID>ENV08001326
Genome IDABMW01058481
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 112
End posion on genome 35
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnncggaaT
tRNA gene sequence 
TCCCAAATAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGCTGGTTCAAG
TCCAGCTTTGGGAGACA
Downstream region at tRNA end position 
aaaaaaatac
Secondary structure (Cloverleaf model)
>ENV08001326	Asn	GTT
                   T      GACA aaaaaaatac
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     A - T          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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