The detailed information of tRNA gene sequence


Sequence ID>WENV183763710
Genome IDPPYE01306918
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 339
End posion on genome 415
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ggttttcaat
tRNA gene sequence
GGCGGCATAGCTCAGTTGGCTAGAGCATGCGGTTCATACCCGCAGTGTCCCCGGTTCAAA
TCCAGGTGCCGCTACCA
Downstream region at tRNA end position
gaccccaaaa
Secondary structure (Cloverleaf model)
>WENV183763710	Met	CAT
                   t      ACCA gaccccaaaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G A C C     A
      T G A        A      | |   | |     A
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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