The detailed information of tRNA gene sequence


Sequence ID>ENV08001328
Genome IDABMW01061047
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 109
End posion on genome 26
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnttttatac
tRNA gene sequence 
GGAGGAGTTCCCGAGTGGCCAAAGGGGCAGACTGTAAATCTGTTATCAGTGATTTCGGTG
GTTCGAATCCACCCTCCTCCACCA
Downstream region at tRNA end position 
aaaatgattg
Secondary structure (Cloverleaf model)
>ENV08001328	Tyr	GTA
                   c      ACCA aaaatgattg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C A C C     A
      T G A        T      | | | | |     G
    G       G C C C       G G T G G     C
    G           | |                 T T
    C       A A G G
      C A          G     TATCAGTGATTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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