The detailed information of tRNA gene sequence


Sequence ID>ENV08001330
Genome IDABMW01066259
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 18
End posion on genome 93
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aacacccgaa
tRNA gene sequence 
GGGACGGTAGCTCAACTGGAAGAGCACCCGGCTTAAGTCGGGAAGGTTCCGGGTTCGAAT
CCCGGCCGTCCTGCCG
Downstream region at tRNA end position 
gcagtgttgg
Secondary structure (Cloverleaf model)
>ENV08001330	Leu	TAA
                   a      GCCG gcagtgttgg
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C A A        A      | | | | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     AGGTT
                    C   A
                    C - G
                    C - G
                    G   G
                    G - C
                  C       T
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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