The detailed information of tRNA gene sequence


Sequence ID>WENV183764443
Genome IDPPYE01319752
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 14116
End posion on genome 14208
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atttccaagc
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCTAAGGCACTCGACTCGAAATCGAACGTGGGCTTTAAAAC
CCACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gtttttttta
Secondary structure (Cloverleaf model)
>WENV183764443	Ser	CGA
                   c      GCCA gtttttttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          A     CGTGGGCTTTAAAACCCACC
                    C   A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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