The detailed information of tRNA gene sequence


Sequence ID>ENV08001335
Genome IDABMW01073530
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 98
End posion on genome 22
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccgggttgtt
tRNA gene sequence 
GGATTGGTAGTTCAGTTGGTTAGAATGCTGCCCTGTCACGGCAGAGGTCGCGGGTTCGAG
TCCCGTCCAGTCCGCAA
Downstream region at tRNA end position 
aaagcctcaa
Secondary structure (Cloverleaf model)
>ENV08001335	Asp	GTC
                   t      GCAA aaagcctcaa
                     G - C
                     G - C
                     A - T
                     T + G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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