The detailed information of tRNA gene sequence


Sequence ID>WENV183764624
Genome IDPPYE01320251
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 22203
End posion on genome 22279
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gacggtattt
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGTCGACGGTTCGAG
CCCGTTCCGGGTCGCCA
Downstream region at tRNA end position 
ttcttgcctc
Secondary structure (Cloverleaf model)
>WENV183764624	Asp	GTC
                   t      GCCA ttcttgcctc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C G
                    T     T T G C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A C G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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