The detailed information of tRNA gene sequence


Sequence ID>ENV08001337
Genome IDABMW01075747
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ngctgaagtt
tRNA gene sequence 
GCGCGTGTAGCTCAATTGGATAGAGTGTCGGCCTCCGAAGCCGAAGGTTGTGGGTTCGAC
CCCCGCCACGCGCACCA
Downstream region at tRNA end position 
ttcttcgttc
Secondary structure (Cloverleaf model)
>ENV08001337	Arg	CCG
                   t      ACCA ttcttcgttc
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          C C
                    T     C G C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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