The detailed information of tRNA gene sequence


Sequence ID>WENV183765360
Genome IDPPYE01337966
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 174
End posion on genome 82
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaggcgtgtt
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGCGGTCAAAAGCT
GCATCCGGGGTTCGAATCCCCGCCTCACCGCCA
Downstream region at tRNA end position 
tttgcatccg
Secondary structure (Cloverleaf model)
>WENV183765360	Ser	GCT
                   t      GCCA tttgcatccg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGTCAAAAGCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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