The detailed information of tRNA gene sequence


Sequence ID>ENV08001349
Genome IDABMW01107716
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 19
End posion on genome 94
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
taaaacggac
tRNA gene sequence 
GATTCAGTAGCTCAGCTGGTAGAGCACAACACTTTTAATGTTGGGGTCCTGGGTTCGAGC
CCCAGCTGGATCACAA
Downstream region at tRNA end position 
aaacagaaac
Secondary structure (Cloverleaf model)
>ENV08001349	Lys	TTT
                   c      ACAA aaacagaaac
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     A - T
                     G - C          C G
                    T     G A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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