The detailed information of tRNA gene sequence


Sequence ID>WENV183766284
Genome IDPPYE01349855
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 819
End posion on genome 908
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtaaaacagt
tRNA gene sequence 
GGAGTCATGCCTGAGTGGCCGATAGGGGCACCCTGCTAAGGTGTTAGTCGTTTTTAGCGG
CTCGAGGGTTCGAATCCCTCTGACTCCGCCt
Downstream region at tRNA end position 
tgagggtttt
Secondary structure (Cloverleaf model)
>WENV183766284	Ser	GCT
                   t      GCCt tgagggtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G       + | | |                 T T
    C       T A G G
      C G A        G     TAGTCGTTTTTAGCGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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