The detailed information of tRNA gene sequence


Sequence ID>WENV183766369
Genome IDPPYE01353891
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 198
End posion on genome 290
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcatttccac
tRNA gene sequence 
GGAGAGGTGGCCGAGACGGCCGAAGGCGCTCGCCTGCTAAGCGGGTATACGGATAAAACT
GTATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tatttgaatc
Secondary structure (Cloverleaf model)
>WENV183766369	Ser	GCT
                   c      GCCA tatttgaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C A G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    C G A          G     TATACGGATAAAACTGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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