The detailed information of tRNA gene sequence


Sequence ID>ENV08001354
Genome IDABMW01118378
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 31
End posion on genome 105
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ctgtgaatgt
tRNA gene sequence 
TCCTCGGTAGCTCAGTGGTAGAGCAAGCGGCTGTTAACCGCTTGGTCGCTGGTTCGAATC
CGGCCCGGGGAGCCA
Downstream region at tRNA end position 
tttaannnnn
Secondary structure (Cloverleaf model)
>ENV08001354	Asn	GTT
                   t      GCCA tttaannnnn
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
        G A        A      | | + | |     G
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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