The detailed information of tRNA gene sequence


Sequence ID>WENV183766419
Genome IDPPYE01355440
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 347
End posion on genome 271
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aagtaaatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCGGCCCCCGCAACCA
Downstream region at tRNA end position 
ccaagcatct
Secondary structure (Cloverleaf model)
>WENV183766419	fMet	CAT
                   t      ACCA ccaagcatct
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | + + | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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