The detailed information of tRNA gene sequence


Sequence ID>ENV08001355
Genome IDABMW01118711
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 25
End posion on genome 101
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctaatcttaa
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCTCCCGCAACCA
Downstream region at tRNA end position 
aaaaatcatn
Secondary structure (Cloverleaf model)
>ENV08001355	Met	CAT
                   a      ACCA aaaaatcatn
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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