The detailed information of tRNA gene sequence


Sequence ID>WENV183766541
Genome IDPPYE01356980
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 42393
End posion on genome 42469
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taaaagttat
tRNA gene sequence 
GGTTCGGTAGTTCAGCTGGTTAGAATACATGCCTGTCACGCATGGGGTCGCGGGTTCGAG
TCCCGTCCGGACCGCCA
Downstream region at tRNA end position 
gaaacaaaag
Secondary structure (Cloverleaf model)
>WENV183766541	Asp	GTC
                   t      GCCA gaaacaaaag
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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