The detailed information of tRNA gene sequence


Sequence ID>ENV08001357
Genome IDABMW01128402
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 18
End posion on genome 103
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tacatgacgc
tRNA gene sequence 
GCGGTCGTGGCGGAACGGCAGACGCGCTAGCCTCAGGAGCTAGTGGGGGCAACCCCGTGG
AGGTTCAAATCCTCTCGACCGCACCA
Downstream region at tRNA end position 
atttaannnn
Secondary structure (Cloverleaf model)
>ENV08001357	Leu	CAG
                   c      ACCA atttaannnn
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C A A        G      + | | | |     A
    G       G G C G       G G A G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGGGGGCAACCCCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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