The detailed information of tRNA gene sequence


Sequence ID>WENV183766719
Genome IDPPYE01357473
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 18927
End posion on genome 18838
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgcaacagt
tRNA gene sequence 
GGAGTCATGCCTGAGTGGCCGATAGGGGCACCCTGCTAAGGTGTTAGTCGTGTTTAGCGG
CTCGAGGGTTCGAATCCCTCTGACTCCGCCt
Downstream region at tRNA end position 
tgagggtttt
Secondary structure (Cloverleaf model)
>WENV183766719	Ser	GCT
                   t      GCCt tgagggtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G       + | | |                 T T
    C       T A G G
      C G A        G     TAGTCGTGTTTAGCGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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