The detailed information of tRNA gene sequence


Sequence ID>WENV183767045
Genome IDPPYE01360036
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 3600
End posion on genome 3510
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atacttattt
tRNA gene sequence 
GGAGCAGTACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGCAACTGG
CGCGAGGGTTCAAATCCCTCCTGCTCCGCCA
Downstream region at tRNA end position 
ttatgttatt
Secondary structure (Cloverleaf model)
>WENV183767045	Ser	GCT
                   t      GCCA ttatgttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGCAACTGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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