The detailed information of tRNA gene sequence


Sequence ID>WENV183767120
Genome IDPPYE01361080
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 5239
End posion on genome 5165
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnnnnattc
tRNA gene sequence 
GGAGGATTAGCTCAGCTGGTTAGAGCACCTGCATCACACGCAGGGGGTCTGGGGTTCGAG
TCCCTAATTCTCCACtc
Downstream region at tRNA end position 
aaaaatccgt
Secondary structure (Cloverleaf model)
>WENV183767120	Val	CAC
                   c      ACtc aaaaatccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     A - T
                     T - A          T G
                    T     A T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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