The detailed information of tRNA gene sequence


Sequence ID>ENV08001362
Genome IDABMW01141017
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 13
End posion on genome 105
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcttctgaac
tRNA gene sequence 
GGAGACGTGGCCGAGAGGTCGAAGGCACTCCCCTGCTAAGGGAGCATGCGGGCAAAACCT
GCATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gaannnnnnn
Secondary structure (Cloverleaf model)
>ENV08001362	Ser	GCT
                   c      GCCA gaannnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATGCGGGCAAAACCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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