The detailed information of tRNA gene sequence


Sequence ID>ENV08001363
Genome IDABMW01148579
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 91
End posion on genome 15
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tctttcggtt
tRNA gene sequence 
CGGAGTGTGGCGCAGCCTGGTAGCGCATCTGCATGGGGTGCAGAGGGTCGAAGGTTCGAA
TCCTTTCACTCCGACCA
Downstream region at tRNA end position 
agttttgatg
Secondary structure (Cloverleaf model)
>ENV08001363	Pro	GGG
                   t      ACCA agttttgatg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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