The detailed information of tRNA gene sequence


Sequence ID>WENV183767690
Genome IDPPYE01382371
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 969
End posion on genome 1045
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaaaaataa
tRNA gene sequence 
GGCCAAGTAGTTCAGTTGGTTAGAACGCCAGCCTGTCACGCTGGAGGTCGTGGGTTCGAG
CCCCATCTTGGTCGCCA
Downstream region at tRNA end position 
tannnnnnnn
Secondary structure (Cloverleaf model)
>WENV183767690	Asp	GTC
                   a      GCCA tannnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C          C G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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