The detailed information of tRNA gene sequence


Sequence ID>ENV08001367
Genome IDABMW01181500
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 87
End posion on genome 12
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttcgccacgt
tRNA gene sequence 
CGGGGGGTAGCTCAGCTGGGAGAGCGCCGCGTTCGCAATGCGGAGGTCGGGAGTTCGATC
CTCCTCCTCTCCACCA
Downstream region at tRNA end position 
ccaaacgcca
Secondary structure (Cloverleaf model)
>ENV08001367	Ala	CGC
                   t      ACCA ccaaacgcca
                     C   C
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     G - C          C T
                    T     T C C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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