The detailed information of tRNA gene sequence


Sequence ID>ENV08001368
Genome IDABMW01188968
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcactactct
tRNA gene sequence 
GGTTCGGTAGTTCAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCCGTACCGCAA
Downstream region at tRNA end position 
aagcagttca
Secondary structure (Cloverleaf model)
>ENV08001368	Asp	GTC
                   t      GCAA aagcagttca
                     G - C
                     G - C
                     T - A
                     T   T
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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