The detailed information of tRNA gene sequence


Sequence ID>ENV08001370
Genome IDABMW01198533
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 27
End posion on genome 102
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tttaaccatT
tRNA gene sequence 
GCGGCCGTAGCTCAGGTGGATAGAGCGAGCGCCTCCTAAGCACTAGGTCACAGGTTCAAC
TCCTGTCGGTCGCAAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001370	Arg	CCT
                   T      AAnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T C
                    T     T G T C C     A
      G G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    A - T
                    G - C
                    C   A
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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