The detailed information of tRNA gene sequence


Sequence ID>ENV08001371
Genome IDABMW01201075
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 16
End posion on genome 102
Amino Acid Sup
Anticodon CTA
Upstream region at tRNA start position 
ccgcgtccaC
tRNA gene sequence 
GGAGAGATGGCAGAGTGGCCGATTGCGTCTGATTCTAAATCAGATGTGCCGCAAGGTACC
GGGGGTTCGAATCCCTCTCTCTCCGAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001371	Sup	CTA
                   C      GAnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    C       T T G C
      C G A        G     TGTGCCGCAAGGTACC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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