The detailed information of tRNA gene sequence


Sequence ID>WENV183768216
Genome IDPPYE01385489
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 5415
End posion on genome 5488
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
acaataacat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCATTCGTTCGAGT
CGGATCTCCGCAACac
Downstream region at tRNA end position 
acacaagaag
Secondary structure (Cloverleaf model)
>WENV183768216	fMet	CAT
                   t      ACac acacaagaag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A G G C     A
      T G A        G      | | + | |     G
    T       C G A G       A T T C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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