The detailed information of tRNA gene sequence


Sequence ID>WENV183768264
Genome IDPPYE01385823
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 10288
End posion on genome 10216
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnntat
tRNA gene sequence 
CGCGGAGTGGAGCAGTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCGAGTC
TTGCCTCCGCAACta
Downstream region at tRNA end position 
aaaagtcttc
Secondary structure (Cloverleaf model)
>WENV183768264	fMet	CAT
                   t      ACta aaaagtcttc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T T C     A
        G A        G      | + | | |     G
      T     C G A G       G T A A G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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