The detailed information of tRNA gene sequence


Sequence ID>ENV08001373
Genome IDABMW01205781
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 93
End posion on genome 17
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ncgatttgac
tRNA gene sequence 
AGTCCTATAGCTCAGTTGGTTAGAGCGCTACACTGATAATGTAGAGGTCGGCAGTTCAAA
TCTGCCTGGGACTACCC
Downstream region at tRNA end position 
tgggaaaagg
Secondary structure (Cloverleaf model)
>ENV08001373	Ile	GAT
                   c      ACCC tgggaaaagg
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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