The detailed information of tRNA gene sequence


Sequence ID>WENV183768755
Genome IDPPYE01398618
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 2271
End posion on genome 2358
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcagtacta
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGTGACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGttt
Downstream region at tRNA end position 
gatgcaagac
Secondary structure (Cloverleaf model)
>WENV183768755	Ser	GCT
                   a      Gttt gatgcaagac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGTGACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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