The detailed information of tRNA gene sequence


Sequence ID>WENV183768920
Genome IDPPYE01411949
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 178105
End posion on genome 178198
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaccgattgt
tRNA gene sequence 
GGTGAGATGGCCGAGTAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTCAAAAAC
TCCATCGAGGGTTCGAATCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
tttgttttta
Secondary structure (Cloverleaf model)
>WENV183768920	Ser	GCT
                   t      GCCA tttgttttta
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    A T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TATGGGGTCAAAAACTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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