The detailed information of tRNA gene sequence


Sequence ID>WENV183768959
Genome IDPPYE01411988
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 29955
End posion on genome 30044
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttaaatcac
tRNA gene sequence 
GGAGGAATGGTCGAGTGGTTGAAGGCACCGGTCTTGAAAACCGGCGAGGGTTTACGCCCT
CCGTGAGTTCGAATCTCACTTCCTCCGCCA
Downstream region at tRNA end position 
tcaaattcaa
Secondary structure (Cloverleaf model)
>WENV183768959	Ser	TGA
                   c      GCCA tcaaattcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G A G     C
    G         | + |                 T T
    T       A G G C
      T G A        A     CGAGGGTTTACGCCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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