The detailed information of tRNA gene sequence


Sequence ID>WENV183768995
Genome IDPPYE01412075
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 26225
End posion on genome 26314
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaaaataT
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGTTCGCGCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGTta
Downstream region at tRNA end position 
tttttttgcc
Secondary structure (Cloverleaf model)
>WENV183768995	Ser	GCT
                   T      GTta tttttttgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGTTCGCGCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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