The detailed information of tRNA gene sequence


Sequence ID>ENV08001383
Genome IDABMX01000777
Search identical group
Phylum/Classfish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
Species
Start position on genome 36
End posion on genome 111
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gtacctgctt
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCTAGGACATCACCCTTTCACGGTGAGTACGGGGGTTCGAAT
CCCCCAGGGGACGCCA
Downstream region at tRNA end position 
gattttgata
Secondary structure (Cloverleaf model)
>ENV08001383	Glu	TTC
                   t      GCCA gattttgata
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GTAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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