The detailed information of tRNA gene sequence


Sequence ID>WENV183769441
Genome IDPPYE01415181
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 6225
End posion on genome 6311
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagtgtatat
tRNA gene sequence 
GGAGAGATATCGAAGTGGTCATAACGAGGCGGTCTTGAAAACCGTTTGTCCGCAAGGGCG
CGTGGGTTCGAATCCCACTCTCTCCGCta
Downstream region at tRNA end position 
tttgaagaga
Secondary structure (Cloverleaf model)
>WENV183769441	Ser	TGA
                   t      GCta tttgaagaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGTCCGCAAGGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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