The detailed information of tRNA gene sequence


Sequence ID>WENV183769529
Genome IDPPYE01417249
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 3500
End posion on genome 3574
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acaggtaact
tRNA gene sequence 
GGTGCGTTAGTTCAGTTGGTTAGAATACATGCCTGTCACGCATGGGGTCACGGGTTCGAG
TCCCGTACGCACCGCan
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV183769529	Asp	GTC
                   t      GCan nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     T G C C C     A
      T G A        A      | | | | |     G
    T       C T T G       A C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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